[Bioperl-l] Trouble with fetching a sequence from indexed fasta file

[Crabtree, Jonathan]

Hi Oliver-

> fetch($id) with fetch ('orf19.1168.prot_[A.aaa]').  Could 

Your Perl code (see below) says "A_aaa", not "A.aaa", which would
explain the discrepancy (unless the "A.aaa" was a typo in your e-mail):

> $id = 'orf19.1168.prot_[A_aaa]';

If this is the case then perhaps there was a similar typo/error in your
original array of ids, @idlist?

Jonathan