[Bioperl-l] Re: Entrez gene parser code

Stefan Kirov skirov at utk.edu
Tue Apr 12 13:31:58 EDT 2005


Thanks Mingyi,
This is very useful. I am not sure about the namespace. Maybe we should 
have a namespace for low-level parsers that do not create directly 
bioperl objects. What other people think of this?
Stefan

Mingyi Liu wrote:

> Stefan Kirov wrote:
>
>> In order for this parser to work you need to get 
>> GI::Parser::Entrezgene from sourceforge. You can get the address for 
>> this module from the perl doc of entrezgene: perldoc 
>> Bio::SeqIO::entrezgene
>> Stefan
>>
> I just want to add that I will be adding GI::Parser::EntrezGene to 
> cpan in a few days, and most likely the name space will switch to 
> Bio::ASN1 (therefore it'd be Bio::ASN1::EntrezGene) based on PAUSE 
> admin suggestion.
>
> Thanks,
>
> Mingyi
>
>



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