[Bioperl-l] What's wrong with openBQS service?

Wuming Gong gongwuming at gmail.com
Fri Sep 24 03:15:12 EDT 2004


Hi list,
It seems that there is something the soap service of openBQS. I tried
the the one line command in the Bio::Biblio documents ,
perl -MBio::Biblio -e 'print new Bio::Biblio->get_by_id ("94033980")' 
but it throws the following exception just like my other scripts:

------------ EXCEPTION: Bio::Root::Exception -------------
MSG: --- SOAP FAULT ---
SOAP-ENV:Server.Exception: java.lang.OutOfMemoryError
STACK: Error::throw
STACK: Bio::Root::Root::throw
/usr/lib/perl5/site_perl/5.8.0/Bio/Root/Root.pm:328
STACK: try{} block /usr/lib/perl5/site_perl/5.8.0/Bio/DB/Biblio/soap.pm:119
STACK: SOAP::Lite::call /usr/lib/perl5/site_perl/5.8.0/SOAP/Lite.pm:3006
STACK: try{} block /usr/lib/perl5/site_perl/5.8.0/SOAP/Lite.pm:2950
STACK: Bio::DB::Biblio::soap::get_by_id
/usr/lib/perl5/site_perl/5.8.0/Bio/DB/Biblio/soap.pm:368
STACK: -e:1
-----------------------------------------------------------

Regards,
Wuming


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