[Bioperl-l] EMBL Identifier line is incorrect when using SeqIO(1.4)

[simon andrews (BI)]

I subitted a patch to fix this a while back.  I think it's now applied
to the version in CVS.  The bug report has a copy of the patch:

http://bugzilla.open-bio.org/show_bug.cgi?id=1618

Simon.

> -----Original Message-----
> From: Hilmar Lapp [mailto:hlapp at gmx.net] 
> Sent: 21 October 2004 16:42
> To: michael watson (IAH-C)
> Cc: Bioperl
> Subject: Re: [Bioperl-l] EMBL Identifier line is incorrect 
> when using SeqIO(1.4)
> 
> 
> If you make the ID shorter, is there still no space? I believe the ID 
> is length-limited in EMBL, but I'd have to check the specs to be sure.
> 
> 	-hilmar
> 
> On Thursday, October 21, 2004, at 06:38  AM, michael watson (IAH-C) 
> wrote:
> 
> > Hi
> >
> > Using bioperl-1.4 on Suse Linux, I find that when writing 
> sequences in
> > EMBL format using SeqIO, there is no space left after the display_id
> > e.g.
> >
> > "J18191-1h03.p1k" becomes "ID   J18191-1h03.p1kstandard; 
> DNA; UNK; 1657
> > BP."
> >
> > Mick
> >
> >
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> >
> >
> -- 
> -------------------------------------------------------------
> Hilmar Lapp                            email: lapp at gnf.org
> GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
> -------------------------------------------------------------
> 
> 
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