[Bioperl-l] Re: Handling gff3 Target and Dbxref tags through FeatureIO

Scott Cain cain at cshl.org
Thu Oct 21 13:41:00 EDT 2004


On Wed, 2004-10-20 at 18:47, Allen Day wrote:
> Target tags - Bio::SeqFeature::Annotated needs to be able to have
> Bio::LocatableSeq or Bio::Location::Simple attachments.  Presumably you
> can have multiple targets.  Do something like create methods
> add_location() and locations() methods.
> 
Is there a reason that you can think of that I should use
Bio::LocatableSeq over Bio::Location::Simple, as the latter is probably
more 'simple'.

Thanks,
Scott

-- 
------------------------------------------------------------------------
Scott Cain, Ph. D.                                         cain at cshl.org
GMOD Coordinator (http://www.gmod.org/)                     216-392-3087
Cold Spring Harbor Laboratory



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