[Bioperl-l] dbSNP
Allen Day
allenday at ucla.edu
Mon Jun 28 16:15:00 EDT 2004
if you look in the source code of the parser, you'll see that i don't
handle all the information -- only the information which was relevant to
me at the time i wrote the module. if you need more of the information
parsed out, please submit a patch to the bioperl mailing list (cced here),
or if you already have a cvs account feel free to make the commits
yourself.
-allen
On Mon, 28 Jun 2004, Babenko, Vladimir (NIH/NLM/NCBI) wrote:
> Allen, hi;
> Though I work at the origin of dbSNP I'd appreciate if you could shed
> some light on dbSNP usage ;-)
> Do I take it right that only genomic position is available for the snp in
> dbsnp?
> I know that there is a protein accession in one of the fields? Should I map
> it onto the cds by my self?
> Looks that there's nothing of the kind...
> Thank you,
> Vladimir
>
> -----------------
>
> Vladimir Babenko
>
> Bldg 38A 8S816L
>
> National Center for Biotechnology Information
>
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>
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>
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>
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>
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