[Bioperl-l] Bioperl Blast

[Jason Stajich]

What is your question - which module are you asking about?

I assume StandAloneBlast is up to date - people have reported bugs for
certain features that might not work.  It really needs a maintainer (and a
some re-writes to be more flexible for changes to cmdline options I would
say)  if we want to track all the changes that happen wrt cmdline options.

As for remote blast - you can set everything that the CGI needs if you
know what options you want to send in to the webserver - figuring out
those options of course is the fun part. This also needs a maintainer to
track them and document them.

-jason
On Fri, 20 Aug 2004, Neil C. Christopher wrote:

> I was wondering if the Blast API is up to date?  Does it work with the
> current blast?
>
> Please let me know ASAP.
>
> Thanks,
>
> Neil Christopher
>
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--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu