[Bioperl-l] orthologous genes extracting

[Barry Moore]

Just download the homologene file from 
ftp://ftp.ncbi.nih.gov/pub/HomoloGene/current and read it into a hash.

Barry

Albert Vilella wrote:

>>Is there a way of extracting orthologous genes from homologene database?>
>>    
>>
>>>Is there a perl module to do it?
>>>      
>>>
>
>I remember a post in the ensembl-dev mailing list about this: there is
>something done on the Ensembl API for the Ensembl DB orthology
>relations,
>
>Hope it helps,
>
>    Albert.
>
>  
>
>>Thanks.
>>
>>
>>Songmin Xie
>>
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>>    
>>

-- 
Barry Moore
Dept. of Human Genetics
University of Utah
Salt Lake City, UT