[Bioperl-l] Bio::Graphics::Panel
Miroslava Cuperlovic-Culf
miroslavac at health.nb.ca
Thu Aug 5 08:52:20 EDT 2004
Dear All,
I would like to use Bio::Graphics to present exons mapped to dna in a
gff file. I get nice figure for exact lengths of exons and introns. But
as exons are much shorter than introns it is impossible to see their
lengths. Thus I would like to either present exons in correct lengths
and introns only as "..." or as a number of bases or alternatively as
several figures, one for each exon. Is either of these possible?
From perldoc for Bio::Graphics I understood that it is possible to open
several pictures from one program so I tried to use:
...
my $panel = Bio::Graphics::Panel->new( ...
...
print $panel->gd->gif;
$panel ->finished;...
my $panel1 = Bio::Graphics::Panel->new( ...
...
print $panel1->gd->gif;
$panel1 ->finished;
but in this way I only got the first panel opened.
What am I doing wrong?
Thanks very much for the ongoing help
Mira
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