[Bioperl-l] WARNING INCOMING: collection consolidation

Ewan Birney birney at ebi.ac.uk
Fri Jan 31 08:31:44 EST 2003


On Thu, 30 Jan 2003, Lincoln Stein wrote:

> Hi,
> 
> Paul Edlefsen and I are performing a fairly extensive consolidation of
> the various seqfeature collection classes.  We will make sure that all
> the regression tests pass, but be prepared!  
> 
> When this is done, Bio::SeqFeature::CollectionI, Bio::DasI,
> Bio::Das::SegmentI, and Bio::SeqFeatureHolderI will be collapsed into
> Bio::SeqFeature::CollectionI, and the Bio::SeqFeatureI will be
> modified to implement Bio::SeqFeature::CollectionI.
> 
> Another minor change is that Bio::SeqFeatureI will change from a
> RangeI to a LocationI.  This shouldn't break anything ;-)

Is LocationI is-a RangeI? 


> 
> Regards,
> 
> Lincoln
> 
> -- 
> ========================================================================
> Lincoln D. Stein                           Cold Spring Harbor Laboratory
> lstein at cshl.org			                  Cold Spring Harbor, NY
> 	1 Bungtown Road, Cold Spring Harbor, NY 11724
> ========================================================================
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at bioperl.org
> http://bioperl.org/mailman/listinfo/bioperl-l
> 

-----------------------------------------------------------------
Ewan Birney. Mobile: +44 (0)7970 151230, Work: +44 1223 494420
<birney at ebi.ac.uk>. 
-----------------------------------------------------------------



More information about the Bioperl-l mailing list