[Bioperl-l] project ideas
Jason Stajich
jason@cgt.mc.duke.edu
Tue Jan 21 16:51:22 EST 2003
For all you budding bioperl developers project ideas include:
* Writing a SearchIO plugin for blastz parsing
* re-writing Bio::SeqIO::bsml to use SAX events instead of
XML::DOM, note that a big project that needs to be done design event
based parsing framework for Bio::SeqIO in the same way Bio::SearchIO was
written
* Always need folks to design more test cases that make it into the
t/ tests. Bio::SeqIO could really use a lot more test cases for all the
information that is in a sequence file. This is especially important
as genbank rolls out new changes to the file format.
-jason
--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu
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