[Bioperl-l] Genbank/EMBL output

Matthew Pocock matthew_pocock@yahoo.co.uk
Fri Jan 17 13:33:07 EST 2003


Hi,

Are these the same? I would have thought that:

complement(join(1..50,60..100))

is equivalent to:

join(complement(60..100),complement(1..50))

or do the operators join & complement not work how I thought?

Matthew

Alex Hudek wrote:
> Is it possible to have bioperl output features in Genbank format of the
> form
> 
> complement(join(1..50,60..100))
> 
> rather than
> 
> join(complement(1..50),complement(60..100)) ?
> 
> I understand the former form is more common/accepted?
> 
> 
> Alexander K. Hudek
> The Hospital for Sick Children
> Room 9107, The Centre for Applied Genomics
> 555 University Avenue
> Toronto, Ontario, M5G 1X8, Canada
> Lab phone: 416-813-7638
> Fax: 416-813-8319
> E-mail: alex@genet.sickkids.on.ca
> 
> 
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