[Bioperl-l] Bio::SeqIO::genbank Keywords Question

Hilmar Lapp hlapp@gnf.org
Wed Jan 15 08:37:32 EST 2003


Hmm ... don't know why.

Also, it appears Bio::Seq::RichSeqI::keywords returns a string, not an 
array. It should be an array you would think wouldn't you? I'm 
wondering whether there is a magic reason for all of this or is this 
simply something to be fixed.

	-hilmar

On Tuesday, January 14, 2003, at 08:30  AM, Jonathan B Joseph wrote:

> Why is the semicolon being removed from the keywords line for Genbank? 
> The
> code that does this is at:
>   -Bioperl version 1.02:  Bio::SeqIO::genbank: line 222
>   -Bioperl version 1.2:  Bio::SeqIO::genbank: line 279
>
> According to the NCBI-GenBank Flat File Release 133.0, Distribution 
> Release
> Notes, dated December 15 2002, in section '3.4.8 KEYWORDS Format',  the
> following is stated:
>
>    Keywords are separated by semicolons;
>
> Thanks for your help,
> Jonathan
>
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-- 
-------------------------------------------------------------
Hilmar Lapp                            email: lapp at gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
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