[Bioperl-l] Undefined subroutine &IO:String

[Jason Stajich]

Which version of Bioperl do you have installed.  Via ppm?
Did you also install the IO::String module?


On Tue, 30 Dec 2003, Tim Stakenborg wrote:

> Hey
>
> When I run the following short programme:
>
>
> #! c:\Perl\bin\perl.exe -w -i
>
> use strict;
> use warnings;
> use Bio::Perl;
> use Bio::SeqIO;
>
> my $seq_object= get_sequence('swissprot',"EAEA_HAFAL");
> write_sequence("intimin.fasta",'fasta',$seq_object);
>
>
> I receive the following error:
>
> I receive the following error:
>
> Undefined subroutine &IO::String called at
> C:/perl/site/lib/Bio/DB/WebDBSeqI.pm line 482.
>
> Anybody any idea how to solve this problem?
>
> Kind regards
> Tim
>
>
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at portal.open-bio.org
> http://portal.open-bio.org/mailman/listinfo/bioperl-l
>

--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu