[Bioperl-l] bioperl graphic question

Todd Harris harris at cshl.org
Mon Dec 29 20:52:15 EST 2003


Hi Jun Hu -

As noted in the install guide, you will need to upgrade your libgd.
Although using libgd 1.8.4 may not necessarily result in runtime errors,
graphical elements may not appear as intended.  Some glyphs will not render
at all with 1.8.4.

We needed to move to libgd2 in order to support the generation of both
raster (png) and vector (svg) images from the same codebase.

todd


-- 
Todd W. Harris, PhD
Stein Laboratory
Cold Spring Harbor Laboratory
Cold Spring Harbor, NY 11724
ph 516-367-8394
Fx 516-367-8389
http://www.wormbase.org/
--




> On 12/29/03 4:09 PM, jun hu wrote:

> Sorry , just send an empty email...
> To make the story short, I just install bioperl on my linux box, to keep the
> rpm dependency, I do not upgrade my libgd (1.8.4) to 2.0 version which is
> suggest by installation README. Now the png images I get (using the
> totorial's example) only have bars , but have no legend or labels (text,
> features) ... I am wondering where or not anyone have sucessfully using
> libgd 1.8.4 general useable bioperl png images... or I have to upgrade... ,
> probably there is some other packages causing this problem , but bioperl
> code do not compalin any error itself...
> Happy New Year, everyone.
> Best regards,
> Jun Hu
> UMDNJ
> 
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