[Bioperl-l] some tests fail on Mac OS X

[Jason Stajich]

On Sat, 13 Dec 2003, Koen van der Drift wrote:

>
> On Dec 13, 2003, at 10:44 AM, Jason Stajich wrote:
>
> >
> > AlignIO.t - passes fine for me on all platforms for latest bioperl code
> > so bug have been fixed.
> >
> > ESEfinder & ELM
> >
> > ESEfinder is failing because it requires that HTML::HeadParser also
> > be installed - I have added some bulletproofing code in module so it
> > will
> > at least throw an error
> >
> > installing fink pkg html-parser-pm  solves problem for me, so a prereq
> > I
> > suppose.
>
> Weird, I have it installed too, but these two tests still fail.
>
>
you sure it is the right version for your perl?  perldoc HTML::Entities
definitely works?

> >
> > I'm adding some prereqs to the Makefile.PL - need to see how that
> > operates in real life though..
> >
> >
> > Not had time to investidate the rest.
>
> I'd like to help, but am not sure how. Is there a way to run an
> individual test without using 'make test' ?
>

% make test_ESEfinder

OR

% perl -I. -w t/ESEfinder.t

-jason
>
> thanks,
>
> - Koen.
>

--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu