[Bioperl-l] Re: What happened to my dpAlign module?

[Yee Man Chan]

On Thu, 11 Dec 2003, Heikki Lehvaslaiho wrote:

> Yee Man,
> 
> Could you check 
> 	http://bioperl.org/DIST/current_ext_unstable.tar.gz
> which now contains your additions and comments by Aaron.
> 
> I announced it a few days ago.
> 

Hi Heikki

	I just tried it and it seems to be working (it passed test.pl).
Where is Aaron's comment?

Thanks
Yee Man


> 	-Heikki
> 
> On Thursday 11 Dec 2003 9:30 pm, Yee Man Chan wrote:
> > Hi Heikki and Aaron,
> >
> > 	If there are no other changes since the ext-06 release, then you
> > can use my file:
> >
> > http://www.stanford.edu/~yeeman/bioperl-ext.tar.gz
> >
> > as the ext-07 right off. It is ext-06 with my code and test.pl. I tested
> > it to make sure it can install with no problems. To really use it you
> > also need to include
> >
> > http://www.stanford.edu/~yeeman/dpAlign.pm
> >
> > in the core distribution under Bio::Tools.
> >
> > Regards,
> > Yee Man
> >
> > On Tue, 2 Dec 2003, Heikki Lehvaslaiho wrote:
> > > Aaron,
> > >
> > > I have been concentrating in getting the bioperl-core in shape and have
> > > not done anything to bioperl-ext and bioperl-run. I was hoping of getting
> > > them out some time after core.
> > >
> > > Is the ext in shape? There has not been that many changes in there, has
> > > there? What is your feeling? Could we release a developer snap shot
> > > together with the bioperl-core at the end of the week and epect to be
> > > able to release it in a week or two maximum?
> > >
> > > 	-Heikki
> > >
> > > On Tuesday 02 Dec 2003 12:37 pm, Aaron J.Mackey wrote:
> > > > Hi Yee,
> > > >
> > > > It is still in bioperl-live CVS, and is available in developer's
> > > > releases (the 1.3.x series); it will presumably be a part of the stable
> > > > 1.4.x release series, whenever that happens (Heikki knows more about
> > > > this than I do).
> > > >
> > > > -Aaron
> > > >
> > > > On Dec 1, 2003, at 2:34 PM, Yee Man Chan wrote:
> > > > > Hi Aaron
> > > > >
> > > > > 	I looked at the latest bioperl release but I couldn't find
> > > > > anything about my dpAlign module. What is its status now? You can
> > > > > find my
> > > > > code at
> > > > >
> > > > > http://www.stanford.edu/~yeeman/bioperl-ext.tar.gz
> > > > > http://www.stanford.edu/~yeeman/dpAlign.pm
> > > > >
> > > > > Thanks
> > > > > Yee Man
> > >
> > > --
> > > ______ _/      _/_____________________________________________________
> > >       _/      _/                      http://www.ebi.ac.uk/mutations/
> > >      _/  _/  _/  Heikki Lehvaslaiho    heikki_at_ebi ac uk
> > >     _/_/_/_/_/  EMBL Outstation, European Bioinformatics Institute
> > >    _/  _/  _/  Wellcome Trust Genome Campus, Hinxton
> > >   _/  _/  _/  Cambs. CB10 1SD, United Kingdom
> > >      _/      Phone: +44 (0)1223 494 644   FAX: +44 (0)1223 494 468
> > > ___ _/_/_/_/_/________________________________________________________
> >
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> 
> -- 
> ______ _/      _/_____________________________________________________
>       _/      _/                      http://www.ebi.ac.uk/mutations/
>      _/  _/  _/  Heikki Lehvaslaiho    heikki_at_ebi ac uk
>     _/_/_/_/_/  EMBL Outstation, European Bioinformatics Institute
>    _/  _/  _/  Wellcome Trust Genome Campus, Hinxton
>   _/  _/  _/  Cambs. CB10 1SD, United Kingdom
>      _/      Phone: +44 (0)1223 494 644   FAX: +44 (0)1223 494 468
> ___ _/_/_/_/_/________________________________________________________
>