[Bioperl-l] Bioperl-ext Developer snapshot 1.3.01

[Heikki Lehvaslaiho]

Bioperl-ext Developer snapshot 1.3.01
-------------------------------------

This is a developer release 1.3.01 of Bioperl-Ext which contains C compiled 
Extensions. The stable one will be released together with bioperl core 1.4.

http://bioperl.org/DIST/current_ext_unstable.tar.gz
http://bioperl.org/DIST/bioperl-ext-devel-1.3.01.tar.gz


Changes since 0.6
-----------------

Yee Man Chan's has written alternative pairwise alignment code into
Bio/Ext/Align which is accessed by Bio::Tools::dpAlign in
bioperl-live. Read the README for details


Enjoy,

	-Heikki 
	on behalf of the Bioperl core team


NEW FILES
=========

* Bio/Ext/Align/libs/{dpalign.c dpalign.h linspc.c}
    incorporate Yee Man Chan's alternative alignment code

CHANGES
=======

* README
  updated to include info about dpAlign and common io_lib problems 

* Bio::Ext::Align {Align.xs Makefile.PL typemap}
  incorporate Yee Man Chan's alternative alignment code