[Bioperl-l] Project suggestion: Restriction Enzyme Analysis

[Rob Edwards]

I had been playing with REBASE for a little while, and was in the middle of a 
script to parse one of the rebase files, so I munged that, broke all Steve's 
code, and came up with something to start with.

All of the hard work was already done by Steve and I just moved things around 
enough so that nothing works now (not quite), and plastered my name all over 
the place.

I have added more comments to the bugzilla page 
(http://bugzilla.bioperl.org/show_bug.cgi?id=1422) that describe the changes 
in more detail.

Anyway, take a look and send me comments.

http://www.salmonella.org/bioperl/

Rob


On Tuesday 08 April 2003 09:26 pm, Steve Chervitz wrote:
> Heikki,
>
> Good suggestions. I added my $0.02 to your wish list on bugzilla.
>
> Historical note: I wrote the module back in '97 as a quick example of
> using Bioperl. It's kind of amazing it's lasted this long without major
> revision. I'd like to help out on the face lift.
>
> Steve
>
> On Monday, Apr 7, 2003, at 02:32 US/Pacific, Heikki Lehvaslaiho wrote:
> > If there is someone looking for a way of contributing into BioPerl,
> > here
> > is a project waiting to be done:
> >
> > The Bio::Tools::RestrictionEnzyme is showing its age and needs to be
> > refactored to be more powerful. Some suggestions are in:
> >
> > http://bugzilla.bioperl.org/show_bug.cgi?id=1422
> >
> >
> >
> > 	-Heikki
> >
> > --
> > ______ _/      _/_____________________________________________________
> >       _/      _/                      http://www.ebi.ac.uk/mutations/
> >      _/  _/  _/  Heikki Lehvaslaiho          heikki at ebi.ac.uk
> >     _/_/_/_/_/  EMBL Outstation, European Bioinformatics Institute
> >    _/  _/  _/  Wellcome Trust Genome Campus, Hinxton
> >   _/  _/  _/  Cambs. CB10 1SD, United Kingdom
> >      _/      Phone: +44 (0)1223 494 644   FAX: +44 (0)1223 494 468
> > ___ _/_/_/_/_/________________________________________________________
> >
> > _______________________________________________
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> > Bioperl-l at bioperl.org
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>
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