[Bioperl-l] Re: gbrowse support for file-based databases

Lincoln Stein lstein at cshl.org
Thu Apr 3 12:33:20 EST 2003


I spoke too soon.  Great work Scott!

Lincoln

On Thursday 03 April 2003 09:44 am, Scott Cain wrote:
> On Thu, 2003-04-03 at 09:08, Lincoln Stein wrote:
> > ...lots of gbrowse news...
> >
> >  and Bio::DB::GFF on PostGreSQL is still
> > a ways off.
>
> Actually, I just committed a Postgres adaptor to bioperl at
> Bio/DB/GFF/Adaptor/dbi/pg.pm which seems to work just fine.  I've only
> tested it with the yeast database so far though.  Hopefully the
> performance won't be too bad with a big data set.
>
> Scott

-- 
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Lincoln D. Stein                           Cold Spring Harbor Laboratory
lstein at cshl.org			                  Cold Spring Harbor, NY
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