[Bioperl-l] NT_xxxxx contigs file info

Tue, 16 Jul 2002 10:23:45 +0200

is there a way in bioperl to retrieve and parse contigs
such as NT_xxxxx ,for example:
http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=NT_033929.1
  to get the info on BACs assembly :
CONTIG   join(AP003965.2:1..121852,AP000439.5:51986..105963,
AP001824.4:7542..124888,AP001888.4:3798..161505,
AP000850.4:9247..48539,AP003555.2:16283..121600,
AP000879.4:2012..169725,AP002336.3:1993..112484,
AP000487.5:52296..177074,AP001271.4:23675..210402,
AP000590.6:22311..114287,AP001648.4:25262..166013)

does someone already write something doing that or should it be?

Damien

-----------------------------
Damien Mattei
C.N.R.S / U.N.S.A - UMR 6549
mailto:mattei@unice.fr
http://www-iag.unice.fr/
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