[Bioperl-l] embl format output from Bio::PrimarySeq

[Heikki Lehvaslaiho]

Someone had started writing tests for embl format output from
Bio::PrimarySeq in SeqIO.t. Daniel Baker needed that and wrote his version
for 07 branch, but we are not going give out any more 07 releases, are we?

I fixed embl.pm on the HEAD with minimal code additions (Bio::SeqI
processing is not affected). It will print a warning for each primaryseq
unless you set verbosity < 0:

my $embl = new Bio::SeqIO(-format => 'embl',
                          -verbose => -1);
$embl->write_seq($myprimaryseq);


	-Heikki
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      _/      _/                      http://www.ebi.ac.uk/mutations/
     _/  _/  _/  Heikki Lehvaslaiho          heikki@ebi.ac.uk
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