[Bioperl-l] application

Thu, 17 Jan 2002 18:59:59 +0000

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<P>Hi all,</P>
<P>I wrote an application for processing alignment and calculating consensus sequences.&nbsp; I think it might be useful for somebody.&nbsp; Please send me an e-mail if you are interested.&nbsp; It is freeware.&nbsp; &nbsp; </P>
<P>It is easy to use the program.&nbsp; The program&nbsp;runs in the directory saving forward and backward sequences, and&nbsp;an optional&nbsp;reference sequence.&nbsp; It calculates the reverse complemental sequences&nbsp;for backward sequences,&nbsp;and then pair&nbsp;them with corresponding forward sequences.&nbsp; It&nbsp;then calculates the alignment and consensus sequences&nbsp;and saved the results in the same directory.&nbsp; The program&nbsp;works&nbsp;in LINUX.&nbsp; It requires Bioperl and Clustalw module installed.</P>
<P>-JWF&nbsp; </P>
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