[Bioperl-l] Re: all tests pass on head

[Steve Chervitz]

Heikki,

There was still a little trouble with that method. I
cleaned it up and committed my changes. Should be good
to go now.

Another issue I recently noticed: I'm unable to gunzip
the gzipped files in examples/blast/out/NCBI, WUBlast,
etc. Looks like they were not added with the -kb flag,
so cvs doesn't treat them as binary. They'll need to
be removed and re-added. 

I just updated the CVSROOT/cvswrappers file so the -kb
flag will be automatically added to all new .gz files
(as well as some other known binary types).

Steve

--- Heikki Lehvaslaiho <heikki@ebi.ac.uk> wrote:
> 
> Last fixes were to psiblast.pm
> 
> Steve, 
> 
> Could you check that _process_significance is
> logically correct!
> Is minumum value to significance and score is 0?
> 
> Ewan's problems with t_coffee tests were caused by a
> really old program
> version, so even that is in order.
> 
> Let's roll out 0.93!
> 
> 	-Heikki
> 
> -- 
> ______ _/     
>
_/_____________________________________________________
>       _/      _/                     
> http://www.ebi.ac.uk/mutations/
>      _/  _/  _/  Heikki Lehvaslaiho         
> heikki@ebi.ac.uk
>     _/_/_/_/_/  EMBL Outstation, European
> Bioinformatics Institute
>    _/  _/  _/  Wellcome Trust Genome Campus, Hinxton
>   _/  _/  _/  Cambs. CB10 1SD, United Kingdom
>      _/      Phone: +44 (0)1223 494 644   FAX: +44
> (0)1223 494 468
> ___
_/_/_/_/_/________________________________________________________


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