[Bioperl-l] bioperl-live make on Irix 6.5

[Kris Boulez]

Irix doesn't seem to like the Makefile that's generated. This is on a
fresh check out.

$ uname -a
IRIX64 deepskyblue 6.5 10181058 IP27
$ perl -v

This is perl, v5.6.1 built for IP27-irix

$ perl Makefile.PL 
Generated sub tests. go make show_tests to see available subtests
[...]
Checking if your kit is complete...
Looks good
Writing Makefile for Bio
$ make
couldn't load shell: Argument list too long (bu22).
*** Error code 1 (bu21)


If I do it as root, everything works.

t/consed............ok 11/12-------------------- WARNING
---------------------
MSG: Bio::Tools::Alignment::Consed::count_sequences_with_grep: This sub
uses grep which is doesn't run on this operating system, AFAIK. Sorry
.irix
---------------------------------------------------
t/consed............FAILED test 12                                           
        Failed 1/12 tests, 91.67% okay
[ .. ]
Failed Test Status Wstat Total Fail  Failed  List of Failed
--------------------------------------------------------------------------------
t/consed.t	 12    1   8.33%  12
131 subtests skipped.
Failed 1/91 test scripts, 98.90% okay. 1/2077 subtests failed, 99.95%
okay.
*** Error code 255 (bu21)


P.S. As a normal user I can do "perl Makefile.PL; make; make test" for
bioperl-0.7.2

Kris,
-- 
Kris Boulez 				Tel: +32-9-241.11.00
AlgoNomics NV 				Fax: +32-9-241.11.02
Technologiepark 4 			email: kris.boulez@algonomics.com
B 9052 Zwijnaarde 			http://www.algonomics.com/