[Bioperl-l] bioperl-live test results for openbsd

chris dagdigian dag@sonsorol.org
Tue, 08 Jan 2002 09:35:39 -0500


Anyone done solaris yet? If not I can.

-Chris


This is one of my play boxes so I don't have much if any of the 
dependencies installed...

(1) cvs update -d: OK
(2) uname -a: OpenBSD gw.sonsorol.net 2.9 GENERIC#653 i386
(3) perl -v: This is perl, v5.6.0 built for i386-openbsd




Relevent output
===========

>
> t/BioDBGFF..........Subroutine prompt redefined at t/BioDBGFF.t line 419.
> main::fail() called too early to check prototype at t/BioDBGFF.t line 48.

<snip>

> t/EMBL_DB...........ok 1/11Warning: Couldn't connect to EMBL with 
> Bio::DB::EMBL.pm!
> ------------- EXCEPTION -------------
> MSG: EMBL stream with no ID. Not embl in my book
> STACK Bio::SeqIO::embl::next_seq blib/lib/Bio/SeqIO/embl.pm:152
> STACK Bio::DB::WebDBSeqI::get_Seq_by_acc blib/lib/Bio/DB/WebDBSeqI.pm:162
> STACK (eval) t/EMBL_DB.t:59
> STACK toplevel t/EMBL_DB.t:57
>
> -------------------------------------

<snip>

> All tests successful.
> Files=91, Tests=2077, 147 wallclock secs (52.07 cusr +  7.19 csys =