[Bioperl-l] 0.9.1 release schedule

[Jason Eric Stajich]

I'd like to work towards releasing developer release 0.9.1 at the end of
September.  This may be too ambitious, but I'd like to at least shoot for
it as we need to ramp up for the 1.0 release.

Can people report in on what code they have in progress - I'll outline
some of the major components that would be good to get into a dev release
for extensive testing.  Some of these may need to wait until 0.9.2 which
should go out at the end of October if we have enough new code.

* Application Factory Interface definition (Heikki?)
  - With EMBOSS Support
  - Adapt existing modules to this new interface
  - Result Interface defined

* Genewise plugged into factory AND genewise report parser (Ewan)

* FASTA report parser (Difed and maybe Keith James?)

* Gene Structure Objects declared "Stable" (Mark/Dave PBI superstars)

* Consed/Phred/Phrap (Chad Masala - awaiting legal issues)

  - Assembly object which will interface with new
    BioCORBA/BSANE

* Bio::SeqIO::scf parser fixed?

* Bio::SeqIO::FTHelper handle additional weird cases that are not
  parseable in genbank

* Bio::Tools::Blast status report and plan (Steve C)

* Bio::Tools::BPlite work (Hilmar,Roger,Jason)
  - tblastx frame setting correctly

* TBFS (transcription factor detection and analysis) ( Boris Lenhard)

Other projects I am forgetting about?

-jason

-- 
Jason Stajich
Duke University
jason@cgt.mc.duke.edu