[Bioperl-l] Blast parsing.

David Martin dmartin@bioinformatics.msiwtb.dundee.ac.uk
Mon, 3 Sep 2001 16:53:56 +0100 (BST)


I am in need of a Blast parser so have turned to Bioperl.

Having worked out what I think it is doing there seem to be some gaps int
he details it can report.

The Bio::Tools::Blast object doesn't have any methods for returning the
name of the databases, the database statistics (number of seqs/bases), or
the query sequence details (name, length, type etc.)

Are there any plans for these to be included or should I be looking at a
different module that may be able to help?

..d

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David Martin PhD
Bioinformatics Scientific Officer
Wellcome Trust Biocentre, Dundee
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