[Bioperl-l] Bio::Tools::Genscan
Pan, Youlian
Youlian.Pan@nrc.ca
Wed, 30 May 2001 18:15:33 -0300
Hello,
I am new to Bioperl and writing-up a parser using some of Bioperl modules
for my thesis work at Canadian Bioinformatics Resource in Halifax. I have
used Bio::Tools::Genscan, it worked fine when I invoke my perl script on
command line in Unix, but when I try to print to a web browser (IE or
netscape), I am not able to see anything after I use Bio::Tools::Genscan.
Follow are part of my code:
##########################################################
..............
print "Content-type: text/html\n\n";
print "this is a test\n";
@exons = get_exons();
........................
sub get_exons {
print "<br>I am in the get exons\n";
$genscan = Bio::Tools::Genscan->new(-file => 'result.genscan');
print "<br> I am after Genscan<br>\n";
..................
return @exons;
}
Print out on browser:
this is a test
I am in the get exons
Print out at UNIX:
Content-type: text/html
this is a test
I am in the get exons
I am after Genscan
..................
############################################################
Could anyone explain this discrepancy?
Thanks.
Youlian Pan