[Bioperl-l] XML Blast parsing?

Hilmar Lapp hilmarl@yahoo.com
Sat, 26 May 2001 14:25:17 -0700


Todd Richmond wrote:
> 
> my @params = ('database' => $database, 'program' => 'blastx',
>     'format' => 'XML', '_READMETHOD' => 'BlastXML');
> my $factory = Bio::Tools::Run::StandAloneBlast->new(@params);
> 
> If I wanted to do this, is it best to try to incorporate it like this? I'm

I don't see a big problem in doing so. Ideally, this would also be
incorporated in the network blast. Do you have CVS access?

	Hilmar

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Hilmar Lapp                              email: hilmarl@yahoo.com
GNF, San Diego, Ca. 92122                phone: +1 858 812 1757
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