[Bioperl-l] RE: [Biojava-l] Re: [BioXML-dev] Uniform parsing vocabulary

[Solbrig, Harold R.]

Another possibility

http://www.geneontology.org/

> -----Original Message-----
> From: Bradley Marshall [mailto:bradmars@yahoo.com]
> Sent: Monday, May 21, 2001 12:32 PM
> To: Matthew Pocock; Cox, Greg
> Cc: 'biojava-l@biojava.org'; 'bioperl-l@bioperl.org';
> 'bioxml-dev@bioxml.org'; 'biopython-dev@biopython.org'
> Subject: Re: [Biojava-l] Re: [BioXML-dev] Uniform parsing vocabulary
> 
> 
> 
> Actually, I just looked around for this type of
> ontology last week and found nothing.  I think it
> would be a valuable tool.
> 
> Brad
> 
> --- Matthew Pocock <mrp@sanger.ac.uk> wrote:
> > Propose away - do we have ontologies for these
> > things knocking about yet?
> > 
> > Cox, Greg wrote:
> > 
> > > I apologize for the cross-posting.
> > > 
> > > I'm involved in the BioJava project, and I'm
> > looking at constructing a
> > > uniform vocabulary for the parsed keys.  For
> > example, currently in BioJava,
> > > if an EMBL record is parsed the Organism
> > information goes under the key
> > > 'OS', while if a Genbank record is parsed, the
> > information is under the key
> > > "ORGANISM".  Are there existing standards that
> > define the keys used, or
> > > should I put together a new proposal?
> > > 
> > > Greg Cox
> > > _______________________________________________
> > > BioXML-dev mailing list  -  BioXML-dev@bioxml.org
> > > http://bioxml.org/mailman/listinfo/bioxml-dev
> > 
> > 
> > _______________________________________________
> > Biojava-l mailing list  -  Biojava-l@biojava.org
> > http://biojava.org/mailman/listinfo/biojava-l
> 
> 
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