[Bioperl-l] MSWin Update

Shailesh L Mistry Shailesh L Mistry" <shailesh_mistry@jawssystems.com
Fri, 2 Mar 2001 08:10:05 -0000


HI All,

The latest test results as of this morning are :-

1) BPpsilite fails at test 11 due to "Permission denied at
F:/Perl/site/lib/File/Temp.pm line 789"

2) Index fails at a number of points as follows :-

not ok 1
# Failed test 1 in t\index.t at line 34

gi|238775|bbs|65126 - retrieved length '0' doesn't match known length '70'
# Failed test 2 in t\index.t at line 60

not ok 4
# Failed test 4 in t\index.t at line 77

not ok 5
# Failed test 5 in t\index.t at line 84
--------------------------- EXCEPTION -----------------
MSG: EMBL stream with no ID. Not embl in my book
STACK Bio::SeqIO::embl::next_seq F:/Perl/site/lib/Bio/SeqIO/embl.pm:153
STACK BIO::Index::AbstractSeq::fetch
F:/Perl/site/lib/Bio/Index/AbstractSeq.pm:144
STACK toplevel t\index.t:85

All else is fine. I hope this helps.

Shelly.