[Bioperl-l] bug #249 & FT parsing

Jason Stajich jason@chg.mc.duke.edu
Tue, 20 Feb 2001 12:51:18 -0500 (EST)


On Mon, 19 Feb 2001, Hilmar Lapp wrote:

> Jason Stajich wrote:
> > 
> > On a similar note, the following is the behavior for SeqIO when reading
> > GenBank/EMBL
> > [IN]
> > Exon     <100..>400
> > [OUT]
> > Exon     <100..400>
> > 
> > According to our discussions this is okay, just wanted to put it out
> > there.
> > 
> 
> <100..400> is wrong syntax according to the grammar definition, we
> discussed that (<100..>400 is correct). If this is printed right
> now by our modules it needs to be fixed. See also the example at
> http://www.ncbi.nlm.nih.gov/collab/FT/index.html#immunoglobulin
fixed.
> 
> 	Hilmar
> 
> -- 
> -----------------------------------------------------------------
> Hilmar Lapp                              email: hlapp@gmx.net
> GNF, San Diego, Ca. 92122                phone: +1 858 812 1757
> -----------------------------------------------------------------
> 

Jason Stajich
jason@chg.mc.duke.edu
Center for Human Genetics
Duke University Medical Center 
http://www.chg.duke.edu/