[Bioperl-l] accessing optional qualifiers within features?

[Ewan Birney]

On Sat, 11 Nov 2000, Samuel Aparicio wrote:

> Hi everyone
> I am wondering if there is a method in Bioperl which allows access to
> optional qualifiers with features in a genbank/embl entry. For example,
> being able to parse out
> the value of /note in the example below.
> 
>  repeat_region   1586..1760
>                      /note="L1M1 repeat: matches 5299..5484 of
> consensus"

;) I know what generates those comments...

go for @values =  $seqfeature->each_tag_value('note');


> 
> regards
> 
> Sam Aparicio
> 
> -----
> Samuel Aparicio | Wellcome Institute for Molecular Mechanisms in Disease
> 
> Addenbrookes, Cambridge CB2 2XY. +44 1223 762663 (tel)
> saparici@hgmp.mrc.ac.uk
> 
> 
> 
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l@bioperl.org
> http://bioperl.org/mailman/listinfo/bioperl-l
> 

-----------------------------------------------------------------
Ewan Birney. Mobile: +44 (0)7970 151230, Work: +44 1223 494420
<birney@ebi.ac.uk>. 
-----------------------------------------------------------------