[Bioperl-l] Bio::Tk::HitDisplay

Heikki Lehvaslaiho heikki@ebi.ac.uk
Mon, 06 Nov 2000 11:22:08 +0000


Heikki Lehvaslaiho wrote:
> 
> Keith James wrote:
> >
> > Hi all,
> >
> > I've committed a Frame-based Tk widget to Bio::Tk which represents
> > Blast/Fasta results as sets of coloured bars on a canvas. A demo
> > script called hitdisplay.pl is in bioperl-live/examples and contains
> > example code for transforming a BPlite Blast Hit into the data
> > structure used by the widget to draw the picture.
> 
> Looks great, James.
> 
> Tip to others:
> 
>         (You'll need bioperl-gui installed first)

	I was wrong. All you need installed apart from bioperl-live 
        from CVS repository is the perl Tk.

	This is a bit confusing. A GUI example which is not part of
	bioperl-gui.

		-Heikki

>         cd .../bioperl-live/examples
>         zcat blast/out/tblastn.206.out.gz | hitdisplay.pl
> 
>         right and left click sequence names at left
> 
>   -Heikki