Bioperl: Bio::Seq::sub_species

[Francis Ouellette]

> Does anyone know what the sub_species() method is
> doing in Bio::Seq?

Is it returning sub-species information?  Such as 'strains' [e.g 
[/strain="O157:H7"] or [ /strain="K12"] or [strain="C57BL/6"]; 
cultivars [e.g. /cultivar="Columbia"]) and the likes?

f.


--
| B.F. Francis Ouellette                      Tel: (604) 875-3815 | 
| Director, Bioinformatics Core Facility      Fax: (425) 740-6978 | 
| CMMT, UBC, Canada                        http://www.cmmt.ubc.ca | 
| francis@cmmt.ubc.ca                http://www.bioinformatics.ca |




> Date: Tue, 9 May 2000 17:09:14 +0100 (BST)
> From: James Gilbert <jgrg@sanger.ac.uk>
> To: Bioperl <vsns-bcd-perl@lists.uni-bielefeld.de>
> Subject: Bioperl: Bio::Seq::sub_species
> X-URL: http://bio.perl.org/
> X-Administrativa: see footer; if necessary, email to 
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> 
> 
> 
> Does anyone know what the sub_species() method is
> doing in Bio::Seq?
> 
> There is a species() method in there, which
> returns a Bio::Species object (what I expect), and
> we now have a sub_species method on Bio::Species
> objects.
> 
> Bio::Seq::sub_species appears to have been cloned
> from Bio::Seq::species, and the documentation says
> that it returns a Bio::Species object.
> 
> 	James
> 
> James G.R. Gilbert
> The Sanger Centre
> Wellcome Trust Genome Campus
> Hinxton
> Cambridge                        Tel: 01223 494906
> CB10 1SA                         Fax: 01223 494919
> 
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