Bioperl: Re: webblast not working

[Steve Chervitz]

Janet,

Until the Bioperl webblast facility is fixed, I would recommend using
one of the webblast perl scripts available from this site:

http://www.genet.sickkids.on.ca/bioinfo_resources/software.html

The bioperl code was originally based on one of these scripts.
Or, use one of the other search launchers you mentioned.

Yes, it would be a good idea to make a note about this on the
website. 

Steve

Janet Young <janety@u.washington.edu> writes:
 > Thanks Steve
 > 
 > I guess it will be a while until the next release so I should probably
 > find another solution - any suggestions? I will look into the NCBI or
 > BCM search launchers. I can still use the blast parser though - that'll
 > be useful.
 > 
 > maybe it's worth changing the documentation on www.bioperl.org to tell
 > people webblast isn't working. novices like me spend a long time looking
 > for our own mistakes before we assume a program isn't functional!
 > 
 > Janet
 > 
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