[Bioperl-l] BOF
gidon
gidon@gidon.com
Tue, 15 Aug 2000 12:27:05 -0400
How about PDL (Perl Data Language)
That's an add on that lets you manipulate
matrixes in perl very quickly.
http://www.aao.gov.au/local/www/kgb/perldl/
There are some neat demos of imagery done with it, too.
Andrew Dalke wrote:
>
> Hilmar Lapp:
> >Yes, I agree. Has anyone of you seen e.g. the Khoros workspace for image
> >and data analysis? For those who haven't, Khoros (www.khoral.com) is a
> >package of a whole bunch of modules (libraries) and programs for various
> >tasks in image (and, more general, data matrix) analysis.
>
> When I looked at it (admittedly about 4 years ago so my memory can be
> faulty) it didn't handle non-image data very well. I like arrays, up
> to 5 dimensions, of simple data types.
>
> >I guess (I even know) that there are other visual programming tools
> >implementing such a concept, too.
>
> My preference these days would be to look at OpenDX (www.opendx.org)
> which is IBM's open sourced Data Explorer. I know it can handle
> structure visualization since that's what Cornell did.
>
> Another option (costs major $$) is AVS. That's what Scripps uses
> in-house for structure visualization.
>
> I think they can be useful and would like to experiment with them.
> Just haven't had the time so far :(
>
> Andrew
> dalke@acm.org
>
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