Bioperl: Bio::Tools::Blast->new on sequence file w/no hits, throws fatal exception. Any ideas?

Nathan O. Siemers siemersn@bms.com
Fri, 28 May 1999 05:11:19 -0400


I definitely agree.

Michael Lonetto <lonettma@mh.us.sbphrd.com> writes:

> I agree with Steve Brenner on this:  the absence of hits below a significance
> level is often one of the things I'm looking for when I parse a stream of blast
> results for, say, all the orfs in one genome compared to all the orfs in a
> closely related species.  I thus have to deal with the "no hits" by

....

nathan

-- 
N a t h a n   O .  S i e m e r s
Bioinformatics
Division of Applied Genomics
Bristol-Myers Squibb Pharmaceutical Research Institute
Hopewell Building 3B, P.O. Box 5400, Princeton, NJ 08543-5400
609 818-6568
siemersn@bms.com
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