[Bioperl-announce-l] From MEME output to EST ... ??
Wed, 03 Jul 2002 01:18:57 +0800 (CST)
I want to use the output (*.prf) of MEME in GCG
to search any match seq in EST database
but I had two difficulties
1) Due to using protein seq to generate profile
How can I use the protein profile to search the DNA (EST) database !?
2) I can't find the program accepting the profile file generated by MEME in GCG
Is there any program which is able to recognize the file "*.prf"?
Anyone can give me some suggests?
or can indicate other way out?
Thank you very much!