[BioLib-dev] BioLib

[Pjotr Prins]

There was a problem with the rqtl submodule. I had used a private git
URL for that. Sorry.

I updated the git submodule URL for rqtl to a public repository. You
may also need to synchronize your .git/config with .gitmodules to the
public version:

- url = git at github.com:pjotrp/rqtl.git
+ url = git://github.com/pjotrp/rqtl.git

Or checkout the full repository again.

Next run:

  git submodule init
  git submodule update
  git submodule

And two submodules should be visible:

   6e518d0d3132561403f7bcd7356175651c28e316 src/clibs/rqtl (heads/master)
   145f414cd7400a300771b1722f3bda24fc96d50f tools/rubydoctest (REL-1.0-9-g145f414)


Pj.

On Sun, Apr 26, 2009 at 04:12:31PM +0530, Anup Bishnoi wrote:
> i ran ./configure --with-ruby again. here's the output:
> _____________________
> 
> $ ./configure --with-ruby
> BioLib building all libraries
> --with-ruby: -DBUILD_RUBY:BOOLEAN=TRUE
> :
> removed `CMakeCache.txt'
> removed `./CMakeFiles/CompilerIdC/a.out'
> removed `./CMakeFiles/CompilerIdC/CMakeCCompilerId.c'
> removed directory: `./CMakeFiles/CompilerIdC'

<snip>

> ZLIB_INCLUDE_DIR=/usr/include
> ZLIB_LIBRARY=/usr/lib/libz.so
> ZLIB_NAME=libz.so
> CMake Error at src/clibs/CMakeLists.txt:21 (add_subdirectory):
>   add_subdirectory given source "rqtl/contrib/biolib" which is not an
>   existing directory.
>