[Biojava-l] reading genbank data

[Hannes Brandstätter-Müller]

I still need to finish up the last task (unfortunately I'm a bit short on
spare time currently) but I guess since it's parsing, I could work on
that...

Hannes


On Fri, May 24, 2013 at 7:36 AM, Andreas Prlic <andreas at sdsc.edu> wrote:

> Hi Hannes,
>
> would you be interested in taking this one on?
>
> Thanks,
>
> Andreas
>
>
> On Thu, May 23, 2013 at 1:14 PM, Hannes Brandstätter-Müller <
> biojava at hannes.oib.com> wrote:
>
>> Well, it doesn't look like that was ported to biojava 3 yet.
>>
>> We'll add that to the todo list…
>>
>>
>> On Thu, May 23, 2013 at 8:53 PM, Ben Bimber <bbimber at gmail.com> wrote:
>>
>> > Hello,
>> >
>> > To date, I have used BioJava3 for very limited work such as read/writing
>> > FASTA files.  I am trying to determine the best method to read and parse
>> > sequence in genbank format using java.  As far as i can tell, legacy
>> > BioJava has classes to support this (RichSequence.IOTools); however, I
>> do
>> > not see anything in BioJava3 related to parsing Genbank.  Does BioJava3
>> > have support for parsing genbank files?
>> >
>> > Thanks in advance for any help.
>> >
>> > -Ben
>> > _______________________________________________
>> > Biojava-l mailing list  -  Biojava-l at lists.open-bio.org
>> > http://lists.open-bio.org/mailman/listinfo/biojava-l
>> >
>>
>> _______________________________________________
>> Biojava-l mailing list  -  Biojava-l at lists.open-bio.org
>> http://lists.open-bio.org/mailman/listinfo/biojava-l
>>
>
>
>
>