[Biojava-l] Large RichSequence collection

[Khalil El Mazouari]

Hi,

I have to process large dataset of DNA sequence(>= 120.000 seq). Sequences are first annotated, clustered ... I end up with huge collection of SimpleRichSequence objects consuming a lot of RAM.

Any suggestion on how to deal effectively with large collection of RichSequence objects is welcome.

Thanks in advance.

khalil






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