[Biojava-l] biojava, clouds, and contrail

[Jeremy Lewi]

Hi BioJava users,

I discovered BioJava the other day while looking for some java libraries to
process reads. I've been working on an assembler, Contrail,
http://sourceforge.net/apps/mediawiki/contrail-bio/index.php?title=Contrail,
which uses map reduce. I'd like to get more involved in the bioinformatics
community so I thought I'd say hello to this group.

Unfortunately, when we first started coding Contrail I didn't do a proper
Google search to see if their were existing libraries for things like DNA
sequence manipulation we just rolled out own because it was faster.

Anyways if folks want to chat more please let me know,

Best
J