[Biojava-l] atomcache with a file
Andreas Prlic
andreas at sdsc.edu
Fri Sep 16 03:52:01 UTC 2011
Hi Jay,
you can use it like this:
// by default PDB files will be stored in a temporary directory
// there are two ways of configuring a directory, that can get
re-used multiple times:
// A) set the environment variable PDB_DIR
// B) call cache.setPath(path)
AtomCache cache = new AtomCache();
try {
// alternative: try d4hhba_ 4hhb.A 4hhb.A:1-100
Structure s = cache.getStructure("4hhb");
System.out.println(s);
} catch (Exception e) {
e.printStackTrace();
}
Hope that helps,
Andreas
On Thu, Sep 15, 2011 at 8:32 PM, Jay Vyas <jayunit100 at gmail.com> wrote:
> Hi guys : Anyone want to share a code snippet to use AtomCache to load a PDB
> File from disk ?
>
> --
> Jay Vyas
> MMSB/UCHC
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