[Biojava-l] Multiple Sequence Alignment - Limits?

[Andreas Prlic]

Hi Hannes,

did you try to increase memory settings for your JVM?  e.g. -Xmx500M

Andreas

On Tue, Oct 18, 2011 at 2:46 AM, Hannes Brandstätter-Müller
<biojava at hannes.oib.com> wrote:
> On Tue, Oct 18, 2011 at 11:32, Hannes Brandstätter-Müller
> <biojava at hannes.oib.com> wrote:
>> Hi again!
>>
>> I am quite happy with the Multiple Sequence Alignment, but I noticed
>> that there seems to be a limit of 132 Sequences that are present in
>> the final alignment - is this some kind of hardcoded limit, or can I
>> work around that somehow?
>>
>> Hannes
>>
>
> Sorry, I counted that wrong. I had 132 lines, that is 66 sequences in
> fasta format. Is there a way to work around that limit?
>
> Hannes
>
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