[Biojava-l] Biojava implementation of CE algorithm

[Daniel Asarnow]

The two distributions available on the CE homepage are the "Linux"
version I used above, apparently from 2001, and a tarball from 2004
containing a SPARC32/Solaris binary.

But I think they are all (including Biojava) giving approximately the
same results?

-da

On Sun, Jun 19, 2011 at 19:13, Andreas Prlic <andreas at sdsc.edu> wrote:
>> and from the original C version:
>> Structure Alignment Calculator, version 1.02, last modified: Jun 15, 2001.
>
>> The web version of CE is the same except for 1 fewer equivalent
>> residues (CPU/FPU differences?)
>
> There are different versions of CE out there that have been developed
> over time. I believe the BioJava code is based on the version from
> 2003 or 2004 (CE version 2.3).
>
> Andreas
>