[Biojava-l] Isoelectric point and molecular weight calculations with BioJava

[Andreas Prlic]

Hi Peter,

if you get a copy of biojava 1.8, it is still there. However I would
like to port this to biojava 3 as well.. George do you want to help me
with that, since you are one of the authors of this package? The basic
support for chemistry in BioJava 3 is a bit better... (e.g. Element
class)

Andreas

On Thu, Feb 24, 2011 at 7:33 AM, Peter Troshin <p.v.troshin at dundee.ac.uk> wrote:
> Hi,
>
> I've noticed that BioJava up to about version 1.7 had an
> org.biojava.bio.proteomics package, which had methods for isoelectric point
> and molecular weight calculations for peptides. I could not find this
> package in the BioJava 3.0.1 API. I’d like to use these methods and wonder
> if there are any equivalent methods available in the latest version of
> BioJava?
>
> Thank you for your help,
>
> Kind regards,
> Peter
>
> Dr Peter Troshin
> Bioinformatics Software Developer
> Phone: +44 (0)1382 388589
> Fax: +44 (0)1382 385764
> The Barton Group
> College of Life Sciences
> Medical Sciences Institute
> University of Dundee
> Dundee
> DD1 5EH
> UK
>
>
>
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