[Biojava-l] GSoC Application

[Andreas Prlic]

Hi Mark,

looks pretty good,

* The time schedule feels tight. Where do you see possible
difficulties and risks. What might take longer than expected?

* I would like to be able to use 3D structure alignment information to
guide the final alignment. This should increase reliability of the
final alignment for remote sequence similarities. Any thoughts on how
to accomplish this?

Andreas




On Thu, Apr 8, 2010 at 5:47 AM, Mark Chapman <chapman at cs.wisc.edu> wrote:
> I would appreciate any feedback on my proposal from mentors or other
> developers.  Check it out at:
> http://socghop.appspot.com/gsoc/student_proposal/show/google/gsoc2010/mark_chapman/t127055148817
>
> Thanks in advance,
> Mark
> _______________________________________________
> Biojava-l mailing list  -  Biojava-l at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/biojava-l
>



-- 
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Dr. Andreas Prlic
Senior Scientist, RCSB PDB Protein Data Bank
University of California, San Diego
(+1) 858.246.0526
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