[Biojava-l] Webservices clients in bio-java

Andreas Prlic andreas at sdsc.edu
Thu May 28 14:59:17 UTC 2009


makes sense and fits to the more detailed discussion we are having on
biojava-dev right now.

A


On Thu, May 28, 2009 at 5:29 AM, James Procter
<jimp at compbio.dundee.ac.uk> wrote:
> Hi All.
>
> Mark Schreiber wrote:
>> There was a recent discussion of generated code on the list. A good solution
>> for webservices may be to put the wsdl and high level api in the repository
>> and let jax-ws tools autogenerate the client biolerplate code.
>
> Just to clarify - by high-level API you mean the interface to the code
> that takes biojava objects as arguments and translates them into
> parameters for the service and vice versa for the results ?
>
> With regard to the recent(ish) discussion about modularisation in BJ3,
> I'd suggest that a module is created for each distinct WSDL containing
> the glue code for connecting BJ objects with the boilerplate code. The
> glue code implements factory methods to generate instances of
> appropriate BJ service APIs, which are defined in a core BJ module. This
> means that the WSDL + API implementation is decoupled from the BJ
> service API.
>
> Does that make sense (and/or am I simply stating the obvious here) ?
>
> Jim.
>
> --
> -------------------------------------------------------------------
> J. B. Procter  (ENFIN/VAMSAS)  Barton Bioinformatics Research Group
> Phone/Fax:+44(0)1382 388734/345764  http://www.compbio.dundee.ac.uk
> The University of Dundee is a Scottish Registered Charity, No. SC015096.
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